When you kill all three lieutenants you are invited to confront the main boss. You can do that when you choose to; but once you engage him it initiates the final mission of the game and the story ends. You can then continue to explore the map and complete the side missions and challenges even though the main story is over. #5.
Hoonsy Apr 1, 2018 @ 8:03am. I believe the canon sequence is John > Jacob > Faith (Jacobs area has minor foreshadowing regarding Faith. Faith also requires most resistance points). That said, Faith>Jacob>John is a bit more logical, but also harder to pull of and sports some sequence breaks. #13.
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